Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3046

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3045: 11413 - Hypothetical Protein, at 182948 to 183820 11413 mRNA_3046: 11414 - Hypothetical Protein, at 184191 to 185834 11414 mRNA_3047: 11415 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 186454 to 188264 11415

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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183,291 - 11413 mRNA_3045 0.39 -1.2
183,315 - 11413 mRNA_3045 0.42 -1.1
183,335 - 11413 mRNA_3045 0.44 -1.9
183,508 - 11413 mRNA_3045 0.64 -0.3
183,524 - 11413 mRNA_3045 0.66 -1.6
183,585 - 11413 mRNA_3045 0.73 -2.6
183,607 + 11413 mRNA_3045 0.75 -2.5
183,631 + 11413 mRNA_3045 0.78 1.1
183,634 + 11413 mRNA_3045 0.79 -3.1
183,656 - 11413 mRNA_3045 0.81 -1.1
183,657 + 11413 mRNA_3045 0.81 -1.0
183,676 - 11413 mRNA_3045 0.83 -0.6
183,699 + 11413 mRNA_3045 0.86 -2.2
183,704 + 11413 mRNA_3045 0.87 -4.6
183,715 + 11413 mRNA_3045 0.88 0.6
184,491 + 11414 mRNA_3046 0.18 -0.9
184,520 - 11414 mRNA_3046 0.20 -3.3
184,601 + 11414 mRNA_3046 0.25 -2.1
184,798 - 11414 mRNA_3046 0.37 0.1
185,167 + 11414 mRNA_3046 0.59 -1.9
185,381 + 11414 mRNA_3046 0.72 -1.3
185,401 + 11414 mRNA_3046 0.74 -1.6
185,515 + 11414 mRNA_3046 0.81 -2.9
185,618 - 11414 mRNA_3046 0.87 0.1
185,786 + -0.0
185,917 - -3.3
185,976 + -0.8
186,020 - -2.4
186,051 - -0.8
186,187 - -1.2
186,212 - -1.5
186,212 - -2.4
186,226 - -2.0
186,229 + -1.9
186,345 - -0.8
186,359 - -0.4
186,397 + -2.3
186,502 - -1.0
186,503 - -2.1
186,506 + -1.7
186,510 - -0.4
186,526 + -2.3
186,560 + -1.9
186,702 + 11415 mRNA_3047 0.14 -0.2