Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3024

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3023: 11391 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 119242 to 120921 11391 mRNA_3024: 11392 - K20366 ERGIC2, ERV41 endoplasmic reticulum-Golgi intermediate compartment protein 2, at 121077 to 122686 11392 mRNA_3025: 11393 - K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1, at 123207 to 127605 11393

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
120,859 + -1.0
120,881 - -1.9
120,995 - -2.4
121,004 - -0.3
121,128 + -0.3
121,138 - -1.2
121,148 + 2.5
121,289 - 11392 mRNA_3024 0.13 -2.6
121,296 - 11392 mRNA_3024 0.14 1.1
121,322 + 11392 mRNA_3024 0.15 3.1
121,720 + 11392 mRNA_3024 0.40 -1.8
121,786 - 11392 mRNA_3024 0.44 -0.1
121,869 - 11392 mRNA_3024 0.49 -0.6
122,020 + 11392 mRNA_3024 0.59 -1.1
122,032 + 11392 mRNA_3024 0.59 -3.4
122,133 - 11392 mRNA_3024 0.66 0.9
122,196 + 11392 mRNA_3024 0.70 -4.2
122,423 + 11392 mRNA_3024 0.84 -2.0
122,474 + 11392 mRNA_3024 0.87 -1.0
122,561 + -1.4
122,615 + -0.6
122,615 + -0.5
122,669 - -1.5
122,902 + -0.6
122,918 - -1.5
122,921 + -2.6
123,047 - -1.6
123,060 - -2.4
123,071 + 0.5
123,072 + -1.5
123,194 - -2.1
123,384 + -0.1
123,385 + -0.7
123,403 + -0.5
123,413 + 0.6