Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2970

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2968: 11336 - Hypothetical Protein, at 673383 to 681780 11336 mRNA_2969: 11337 - Hypothetical Protein, at 682054 to 682344 11337 mRNA_2970: 11338 - K00219 fadH 2,4-dienoyl-CoA reductase (NADPH2), at 682650 to 684031 11338 mRNA_2971: 11339 - HMMPfam-Anp1-PF03452,SUPERFAMILY--SSF53448, at 684112 to 685866 11339

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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681,662 + 0.4
681,675 + -0.7
681,762 - -1.8
681,762 - 0.6
681,765 + -2.2
681,824 - -3.9
681,951 + -1.7
681,961 - -2.1
681,962 + -0.3
682,008 - -1.6
682,253 - 11337 mRNA_2969 0.68 -1.0
682,265 - 11337 mRNA_2969 0.73 -1.6
682,282 + 11337 mRNA_2969 0.78 -0.7
682,397 - -1.1
682,527 - -0.3
682,542 - -3.4
682,549 + -1.6
682,585 - -0.1
682,587 - 0.2
682,588 + 0.2
682,779 - -1.6
682,853 + 11338 mRNA_2970 0.15 -1.5
682,891 - 11338 mRNA_2970 0.17 -0.8
682,912 + 11338 mRNA_2970 0.19 -1.3
683,050 + 11338 mRNA_2970 0.29 0.4
683,199 - 11338 mRNA_2970 0.40 -2.2
683,290 + 11338 mRNA_2970 0.46 -3.4
683,293 - 11338 mRNA_2970 0.47 -2.5
683,302 + 11338 mRNA_2970 0.47 -1.8
683,322 - 11338 mRNA_2970 0.49 -1.8
683,407 - 11338 mRNA_2970 0.55 -2.6
683,407 - 11338 mRNA_2970 0.55 -1.8
683,408 - 11338 mRNA_2970 0.55 -2.1
683,421 + 11338 mRNA_2970 0.56 -0.6
683,429 - 11338 mRNA_2970 0.56 -2.1
683,595 - 11338 mRNA_2970 0.68 0.1
683,752 + 11338 mRNA_2970 0.80 -1.0
683,787 + 11338 mRNA_2970 0.82 -1.9
683,795 - 11338 mRNA_2970 0.83 -1.4
683,798 + 11338 mRNA_2970 0.83 -0.3
683,844 - 11338 mRNA_2970 0.86 -1.1
683,862 + 11338 mRNA_2970 0.88 -2.1
683,865 - 11338 mRNA_2970 0.88 -0.5
683,896 - -0.7
684,027 - -1.4
684,083 + 0.3
684,294 - 11339 mRNA_2971 0.10 -0.7
684,354 + 11339 mRNA_2971 0.14 -1.8
684,498 + 11339 mRNA_2971 0.22 -2.8
684,604 + 11339 mRNA_2971 0.28 0.9
684,633 + 11339 mRNA_2971 0.30 -0.3
684,642 - 11339 mRNA_2971 0.30 -0.4
684,653 - 11339 mRNA_2971 0.31 -0.0
684,673 + 11339 mRNA_2971 0.32 -3.8
684,778 + 11339 mRNA_2971 0.38 -1.9
684,788 - 11339 mRNA_2971 0.39 1.1
684,816 - 11339 mRNA_2971 0.40 -2.9
684,816 - 11339 mRNA_2971 0.40 0.0
684,819 + 11339 mRNA_2971 0.40 -2.8
684,926 + 11339 mRNA_2971 0.46 -1.3
684,968 - 11339 mRNA_2971 0.49 -2.2
685,026 - 11339 mRNA_2971 0.52 0.6
685,026 - 11339 mRNA_2971 0.52 -1.1
685,029 - 11339 mRNA_2971 0.52 -0.2