Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2969

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2968: 11336 - Hypothetical Protein, at 673383 to 681780 11336 mRNA_2969: 11337 - Hypothetical Protein, at 682054 to 682344 11337 mRNA_2970: 11338 - K00219 fadH 2,4-dienoyl-CoA reductase (NADPH2), at 682650 to 684031 11338

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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681,063 - 0.6
681,224 - -1.7
681,232 - 1.9
681,232 - -0.0
681,245 + -2.4
681,251 - -0.5
681,347 + -1.4
681,367 - -2.6
681,440 + -1.1
681,511 - -1.2
681,512 + -0.4
681,563 + 0.1
681,647 + -1.9
681,662 + 0.4
681,675 + -0.7
681,762 - -1.8
681,762 - 0.6
681,765 + -2.2
681,824 - -3.9
681,951 + -1.7
681,961 - -2.1
681,962 + -0.3
682,008 - -1.6
682,253 - 11337 mRNA_2969 0.68 -1.0
682,265 - 11337 mRNA_2969 0.73 -1.6
682,282 + 11337 mRNA_2969 0.78 -0.7
682,397 - -1.1
682,527 - -0.3
682,542 - -3.4
682,549 + -1.6
682,585 - -0.1
682,587 - 0.2
682,588 + 0.2
682,779 - -1.6
682,853 + 11338 mRNA_2970 0.15 -1.5
682,891 - 11338 mRNA_2970 0.17 -0.8
682,912 + 11338 mRNA_2970 0.19 -1.3
683,050 + 11338 mRNA_2970 0.29 0.4
683,199 - 11338 mRNA_2970 0.40 -2.2
683,290 + 11338 mRNA_2970 0.46 -3.4
683,293 - 11338 mRNA_2970 0.47 -2.5
683,302 + 11338 mRNA_2970 0.47 -1.8
683,322 - 11338 mRNA_2970 0.49 -1.8