Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2965

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333 mRNA_2966: 11334 - KOG3238 Chloride ion current inducer protein, at 669918 to 671056 11334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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665,842 + 11332 mRNA_2964 0.82 1.0
666,254 - -0.0
666,271 + -2.8
666,423 + -2.4
666,551 - -1.5
666,612 - -0.1
666,632 + -1.1
666,634 - -0.5
666,673 + -1.3
666,702 + -2.0
666,930 + -0.6
667,019 + 11333 mRNA_2965 0.11 -1.4
667,650 - 11333 mRNA_2965 0.34 0.6
667,668 - 11333 mRNA_2965 0.34 -0.8
669,037 - 11333 mRNA_2965 0.83 -2.9
669,079 - 11333 mRNA_2965 0.84 0.6
669,089 + 11333 mRNA_2965 0.85 -1.2
669,245 + -1.1
669,552 - -0.1