Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2960

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2959: 11327 - KOG4554 Protein involved in inorganic phosphate transport, at 651549 to 652747 11327 mRNA_2960: 11328 - KOG2617 Citrate synthase, at 653159 to 654002 11328 mRNA_2961: 11329 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 654993 to 657914 11329

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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652,746 - -2.2
653,066 - -1.9
653,166 - -1.9
653,274 - 11328 mRNA_2960 0.14 0.1
653,902 + 11328 mRNA_2960 0.88 0.7
654,382 + -2.7
654,495 - -0.5
654,517 - -1.8
654,672 + -0.7
654,931 - -0.2
654,942 + -0.0