Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2947

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619500 to 621824 11314 mRNA_2947: 11315 - Hypothetical Protein, at 622694 to 625091 11315 mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125 11316

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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621,703 + 0.5
621,735 - 0.0
621,804 + -1.0
621,821 + -0.5
621,965 - -2.6
621,992 - -0.6
622,016 + -0.9
622,134 + -0.8
622,134 + -2.1
622,463 + -3.4
622,720 - -1.9
622,834 + -1.6
622,839 + -0.5
623,093 - 11315 mRNA_2947 0.17 -0.1
623,117 - 11315 mRNA_2947 0.18 -1.2
623,266 - 11315 mRNA_2947 0.24 -0.3
623,389 - 11315 mRNA_2947 0.29 -1.0
623,421 + 11315 mRNA_2947 0.30 -0.6
623,595 - 11315 mRNA_2947 0.38 -0.5
623,714 + 11315 mRNA_2947 0.43 -0.4
623,717 - 11315 mRNA_2947 0.43 -2.6
623,841 - 11315 mRNA_2947 0.48 -0.9
623,857 - 11315 mRNA_2947 0.48 -0.4
623,975 + 11315 mRNA_2947 0.53 -0.8
623,992 - 11315 mRNA_2947 0.54 1.0
624,077 + 11315 mRNA_2947 0.58 -1.9
624,195 - 11315 mRNA_2947 0.63 0.1
624,222 + 11315 mRNA_2947 0.64 -0.1
624,240 - 11315 mRNA_2947 0.64 -1.7
624,612 - 11315 mRNA_2947 0.80 -1.1
624,684 - 11315 mRNA_2947 0.83 -0.6
624,704 - 11315 mRNA_2947 0.84 -2.6
624,707 + 11315 mRNA_2947 0.84 -3.2
624,824 - 11315 mRNA_2947 0.89 -1.8
624,856 - -1.2
624,868 - -0.1
624,870 + -1.3
625,017 - -1.4
625,246 + -1.1
625,404 - -0.9