Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2944

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2944: 11312 - BLAST Putative CigA protein [Rhizopus microsporus], at 614601 to 617050 11312 mRNA_2945: 11313 - K15175 CDC73 parafibromin, at 617308 to 618975 11313

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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613,708 - -0.7
613,719 - -0.9
613,786 - -3.2
613,787 + -1.7
613,787 + 1.4
613,788 + -1.8
613,805 - -0.2
613,816 - -1.3
613,821 + -0.9
613,822 + -1.3
613,885 - -2.5
613,997 + -2.4
614,029 - -1.2
614,044 + -1.2
614,053 - 0.1
614,054 + -3.9
614,055 + 0.1
614,071 + -3.9
614,072 + -2.3
614,072 + -3.0
614,072 - -1.9
614,073 - -3.1
614,076 - -3.2
614,076 - -3.2
614,078 - -1.1
614,084 - -1.7
614,101 - -1.0
614,101 + -1.1
614,101 + -3.5
614,103 - 0.5
614,104 - -2.3
614,105 - -2.1
614,109 - 0.6
614,408 + -2.9
614,549 + -0.4
614,666 - -0.2
614,816 - -1.9
615,280 + 11312 mRNA_2944 0.28 -2.3
615,672 - 11312 mRNA_2944 0.44 0.9
615,834 + 11312 mRNA_2944 0.50 -2.6
616,541 - 11312 mRNA_2944 0.79 -1.2
616,549 - 11312 mRNA_2944 0.80 -1.8
616,565 - 11312 mRNA_2944 0.80 -2.4
616,845 + -1.2
616,851 - -2.2
617,103 - -1.2
617,167 - 0.6
617,178 + -2.1
617,181 + 0.6
617,275 - -1.7
617,327 - -1.8