Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2910

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2909: 11277 - Hypothetical Protein, at 515453 to 516872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278 mRNA_2911: 11279 - BLAST ATP-dependent DNA helicase [Trichosporon asahii v..., at 520470 to 521587 11279

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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516,147 + 11277 mRNA_2909 0.49 -1.8
516,596 - 11277 mRNA_2909 0.80 -0.1
516,762 - -3.8
516,767 - -1.6
516,902 - -0.5
516,904 + -0.7
516,930 + -0.6
516,935 - -1.5
516,951 + -1.9
517,238 + -2.1
517,251 + -1.4
517,415 + -0.4
517,636 + 11278 mRNA_2910 0.17 -0.8
517,659 + 11278 mRNA_2910 0.18 -0.2
517,667 + 11278 mRNA_2910 0.18 -2.5
517,952 + 11278 mRNA_2910 0.27 -0.6
517,952 + 11278 mRNA_2910 0.27 0.6
518,267 + 11278 mRNA_2910 0.36 -0.6
518,270 + 11278 mRNA_2910 0.36 -2.6
518,510 - 11278 mRNA_2910 0.44 -1.5
518,629 - 11278 mRNA_2910 0.48 -1.0
518,659 - 11278 mRNA_2910 0.49 0.4
518,680 + 11278 mRNA_2910 0.49 -4.9
518,681 - 11278 mRNA_2910 0.49 -0.6
519,237 + 11278 mRNA_2910 0.66 -1.7
519,499 + 11278 mRNA_2910 0.75 1.1
519,797 - 11278 mRNA_2910 0.84 -1.0
519,810 + 11278 mRNA_2910 0.84 -2.7
519,974 + 11278 mRNA_2910 0.89 -2.1
520,081 + -0.1
520,093 - 2.0
520,093 - -2.9
520,102 + -0.5