Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2909

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2908: 11276 - KOG3098 Uncharacterized conserved protein, at 512850 to 515031 11276 mRNA_2909: 11277 - Hypothetical Protein, at 515453 to 516872 11277 mRNA_2910: 11278 - K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA, at 517093 to 520320 11278

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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514,659 - 11276 mRNA_2908 0.83 -1.7
514,674 + 11276 mRNA_2908 0.84 -2.1
514,722 - 11276 mRNA_2908 0.86 -3.0
514,777 + 11276 mRNA_2908 0.88 -0.4
515,006 + -0.9
515,591 - -1.7
515,591 - -0.9
515,656 - 11277 mRNA_2909 0.14 -1.7
515,787 + 11277 mRNA_2909 0.24 -0.4
516,147 + 11277 mRNA_2909 0.49 -1.8
516,596 - 11277 mRNA_2909 0.80 -0.1
516,762 - -3.8
516,767 - -1.6
516,902 - -0.5
516,904 + -0.7
516,930 + -0.6
516,935 - -1.5
516,951 + -1.9
517,238 + -2.1
517,251 + -1.4
517,415 + -0.4
517,636 + 11278 mRNA_2910 0.17 -0.8
517,659 + 11278 mRNA_2910 0.18 -0.2
517,667 + 11278 mRNA_2910 0.18 -2.5