Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2898

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479604 to 482899 11265 mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
482,083 - 11265 mRNA_2897 0.75 -2.0
482,400 + 11265 mRNA_2897 0.85 -1.6
482,553 + 11265 mRNA_2897 0.89 -2.3
482,737 + -0.0
482,761 + -0.7
483,214 + -0.0
483,340 + 0.1
483,425 + -0.8
483,430 - -3.6
483,566 - 11266 mRNA_2898 0.10 -2.3
483,572 + 11266 mRNA_2898 0.10 -0.1
483,583 - 11266 mRNA_2898 0.11 -3.2
483,706 + 11266 mRNA_2898 0.13 0.2
483,911 - 11266 mRNA_2898 0.16 -3.9
483,990 + 11266 mRNA_2898 0.18 0.1
484,433 + 11266 mRNA_2898 0.26 -0.9
484,529 + 11266 mRNA_2898 0.28 -2.7
484,573 - 11266 mRNA_2898 0.29 -2.0
484,584 + 11266 mRNA_2898 0.29 -1.1
484,730 + 11266 mRNA_2898 0.31 -1.5
484,894 + 11266 mRNA_2898 0.34 -0.5
484,992 + 11266 mRNA_2898 0.36 -2.3
485,157 + 11266 mRNA_2898 0.39 -1.7
485,163 + 11266 mRNA_2898 0.39 -3.3
485,292 + 11266 mRNA_2898 0.42 1.9
485,498 + 11266 mRNA_2898 0.45 -2.3
485,617 + 11266 mRNA_2898 0.48 -1.6
485,899 - 11266 mRNA_2898 0.53 -1.9
485,902 + 11266 mRNA_2898 0.53 -0.0
486,134 - 11266 mRNA_2898 0.57 -3.2
486,167 - 11266 mRNA_2898 0.58 -2.0
486,513 + 11266 mRNA_2898 0.64 1.2
486,786 - 11266 mRNA_2898 0.69 -1.5
486,789 + 11266 mRNA_2898 0.69 -2.3
486,950 + 11266 mRNA_2898 0.72 -1.8
487,069 + 11266 mRNA_2898 0.74 0.5
487,357 + 11266 mRNA_2898 0.79 -2.5
487,501 + 11266 mRNA_2898 0.82 -0.1
487,716 - 11266 mRNA_2898 0.86 1.5
487,813 - 11266 mRNA_2898 0.87 -2.9
487,989 - -0.7
488,154 + 0.4
488,224 - -4.3
488,235 - -2.2
488,262 + -3.2
488,372 - 0.7
488,389 + -2.3
488,506 - -1.9
488,521 + -1.1
488,534 + 0.9
488,556 + -4.0
488,650 - -1.7
488,712 - 0.4
488,719 + -1.8
488,766 + 1.0
488,806 + -1.2
488,807 - -1.5
488,935 - -1.3
488,937 + -0.8
488,969 - -2.7
488,970 + -3.5
488,997 + 2.1
489,000 + -3.3
489,038 - -2.9