Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2894

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2893: 11261 - HMMPfam-Protein of unknown function (DUF2823)-PF11034, at 473665 to 474267 11261 mRNA_2894: 11262 - SUPERFAMILY--SSF52047, at 474983 to 476277 11262 mRNA_2895: 11263 - KOG3043 Predicted hydrolase related to dienelactone hydrolase, at 476493 to 477623 11263

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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475,240 + 11262 mRNA_2894 0.20 0.7
475,363 - 11262 mRNA_2894 0.29 -1.9
475,645 - 11262 mRNA_2894 0.51 -1.4
475,847 - 11262 mRNA_2894 0.67 -2.4
475,972 + 11262 mRNA_2894 0.76 -3.7
476,247 + -0.2
476,277 + -3.2
476,348 + -4.3
476,381 - -1.6
476,393 + -3.1
476,591 + 1.0
476,606 + 11263 mRNA_2895 0.10 -0.1
476,717 + 11263 mRNA_2895 0.20 -0.6
476,733 + 11263 mRNA_2895 0.21 -1.1
476,739 - 11263 mRNA_2895 0.22 0.2
476,742 - 11263 mRNA_2895 0.22 -0.9
476,876 - 11263 mRNA_2895 0.34 0.3
476,890 + 11263 mRNA_2895 0.35 -1.3
476,991 + 11263 mRNA_2895 0.44 -0.9
477,035 - 11263 mRNA_2895 0.48 -1.1
477,269 + 11263 mRNA_2895 0.69 -3.5