Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2883

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2883: 11251 - K16675 ZDHHC9_14_18 palmitoyltransferase ZDHHC9/14/18, at 445200 to 447494 11251 mRNA_2884: 11252 - K10838 XPC xeroderma pigmentosum group C-complementing protein, at 447802 to 451973 11252

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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444,257 + -3.1
444,361 + 0.8
444,388 - 1.5
444,393 - -0.5
444,474 - -2.4
444,645 + -2.0
444,669 - -0.7
444,828 - -3.0
444,965 + -1.6
445,110 + -1.7
445,112 + -0.9
445,139 - -3.2
445,521 - 11251 mRNA_2883 0.14 -0.1
445,638 - 11251 mRNA_2883 0.19 -0.2
445,880 - 11251 mRNA_2883 0.30 2.3
445,886 + 11251 mRNA_2883 0.30 -2.1
446,275 - 11251 mRNA_2883 0.47 -1.2
447,014 - 11251 mRNA_2883 0.79 0.8
447,118 + 11251 mRNA_2883 0.84 -0.6
447,123 - 11251 mRNA_2883 0.84 -2.8
447,423 - -0.3
447,430 + -1.3
447,586 - -5.3
447,597 + -0.4
447,723 + -1.5
447,748 + -3.3
447,872 + -0.8
447,890 + -1.2
447,985 - -0.6
448,040 + 0.1
448,320 + 11252 mRNA_2884 0.12 -2.2
448,329 + 11252 mRNA_2884 0.13 0.2