Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2882

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2881: 11249 - KOG0254 Predicted transporter (major facilitator superfamily), at 439393 to 442330 11249 mRNA_2882: 11250 - Hypothetical Protein, at 443067 to 444033 11250

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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442,149 - -0.2
442,273 - -0.5
442,279 + -0.1
442,286 - 0.6
442,292 - -1.9
442,375 + -0.2
442,388 - -1.7
442,414 - -0.5
442,434 - -1.2
442,566 - -2.2
442,737 - -2.2
443,016 - -1.6
443,168 + 11250 mRNA_2882 0.10 0.5
443,325 - 11250 mRNA_2882 0.27 -3.3
443,330 - 11250 mRNA_2882 0.27 -1.8
443,337 - 11250 mRNA_2882 0.28 0.2
443,522 - 11250 mRNA_2882 0.47 -0.1
443,793 - 11250 mRNA_2882 0.75 -0.4
443,952 - -3.9
444,035 - 0.7
444,100 + -0.7
444,257 + -3.1
444,361 + 0.8
444,388 - 1.5
444,393 - -0.5
444,474 - -2.4
444,645 + -2.0
444,669 - -0.7
444,828 - -3.0
444,965 + -1.6