Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2865

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393832 to 395067 11232 mRNA_2865: 11233 - SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717, at 395366 to 397041 11233 mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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394,751 - 11232 mRNA_2864 0.74 -0.8
394,992 - 0.4
395,051 - -1.4
395,071 + 0.7
395,224 + -1.4
395,224 + -3.2
395,511 + 2.5
395,762 - 11233 mRNA_2865 0.24 -0.6
395,826 + 11233 mRNA_2865 0.27 0.5
396,060 + 11233 mRNA_2865 0.41 -1.3
396,235 - 11233 mRNA_2865 0.52 -0.7
396,236 + 11233 mRNA_2865 0.52 -0.1
396,697 + 11233 mRNA_2865 0.79 1.0
397,095 + -0.9
397,316 - -1.9
397,472 - -1.1