Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2863

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2862: 11230 - PRINTS-Proline rich extensin signature-PR01217, at 389979 to 392232 11230 mRNA_2863: 11231 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 392445 to 393702 11231 mRNA_2864: 11232 - KOG2699 Predicted ubiquitin regulatory protein, at 393832 to 395067 11232

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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391,786 - 11230 mRNA_2862 0.80 -0.3
391,975 + 11230 mRNA_2862 0.89 -1.9
392,118 + -1.0
392,543 + -2.5
392,698 + 11231 mRNA_2863 0.20 -0.3
393,217 + 11231 mRNA_2863 0.61 -0.8
393,220 - 11231 mRNA_2863 0.62 0.1
393,520 + 11231 mRNA_2863 0.85 -0.9
393,639 + -0.8
393,642 + -1.1
393,794 + -0.9
393,918 - -2.1
393,925 + -0.2
393,933 - -0.9
394,056 - 11232 mRNA_2864 0.18 -1.0
394,057 - 11232 mRNA_2864 0.18 -1.4
394,069 + 11232 mRNA_2864 0.19 0.2