Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2842

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2841: 11209 - KOG3290 Peroxisomal phytanoyl-CoA hydroxylase, at 339851 to 340983 11209 mRNA_2842: 11210 - Hypothetical Protein, at 341749 to 343529 11210 mRNA_2843: 11211 - Hypothetical Protein, at 343923 to 345879 11211

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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341,047 - -1.6
341,054 + -0.9
341,127 - -1.4
341,144 + -4.0
341,278 + -0.8
341,785 - -1.5
342,003 - 11210 mRNA_2842 0.14 -2.9
342,254 - 11210 mRNA_2842 0.28 -2.2
342,254 + 11210 mRNA_2842 0.28 -1.5
342,262 - 11210 mRNA_2842 0.29 -0.7
342,297 + 11210 mRNA_2842 0.31 -2.5
342,357 - 11210 mRNA_2842 0.34 -1.8
342,521 - 11210 mRNA_2842 0.43 -0.1
342,535 + 11210 mRNA_2842 0.44 1.9
342,597 + 11210 mRNA_2842 0.48 0.1
342,622 + 11210 mRNA_2842 0.49 -0.3
343,015 + 11210 mRNA_2842 0.71 -2.7
343,139 - 11210 mRNA_2842 0.78 -1.6
343,396 - 1.3
343,626 - -0.4
343,707 + -0.5
343,738 - -2.0
343,882 - -2.8
344,390 + 11211 mRNA_2843 0.24 -2.8
344,396 - 11211 mRNA_2843 0.24 -1.1