Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2837

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386 11204 mRNA_2837: 11205 - KOG4100 Uncharacterized conserved protein, at 330565 to 331429 11205 mRNA_2838: 11206 - K02934 RP-L6e, RPL6 large subunit ribosomal protein L6e, at 331899 to 332766 11206

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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329,821 + 11204 mRNA_2836 0.70 -1.7
330,525 + -1.7
330,675 - 11205 mRNA_2837 0.13 0.5
330,684 - 11205 mRNA_2837 0.14 -0.7
330,813 - 11205 mRNA_2837 0.29 -1.5
330,974 - 11205 mRNA_2837 0.47 -1.4
331,389 - -2.9
331,529 + -3.1
331,701 + -1.8
331,705 + -1.2
331,732 + -1.3