Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2823

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2822: 11190 - SUPERFAMILY--SSF52047, at 301729 to 303000 11190 mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303480 to 304770 11191 mRNA_2824: 11192 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 304875 to 305755 11192

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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302,659 - 11190 mRNA_2822 0.73 0.1
303,362 + -3.3
303,509 + -2.5
303,567 + -1.5
303,671 - 11191 mRNA_2823 0.15 0.2
303,757 - 11191 mRNA_2823 0.21 -0.8
303,782 - 11191 mRNA_2823 0.23 -1.8
303,796 + 11191 mRNA_2823 0.24 -1.4
303,939 - 11191 mRNA_2823 0.36 -0.8
303,945 + 11191 mRNA_2823 0.36 0.1
303,952 - 11191 mRNA_2823 0.37 -3.7
303,962 + 11191 mRNA_2823 0.37 -2.2
303,964 + 11191 mRNA_2823 0.37 0.7
304,045 - 11191 mRNA_2823 0.44 -1.1
304,090 + 11191 mRNA_2823 0.47 -1.1
304,091 - 11191 mRNA_2823 0.47 -0.1
304,118 - 11191 mRNA_2823 0.49 -0.9
304,131 + 11191 mRNA_2823 0.50 0.4
304,134 - 11191 mRNA_2823 0.51 -2.1
304,237 - 11191 mRNA_2823 0.59 -2.6
304,294 - 11191 mRNA_2823 0.63 -3.4
304,294 - 11191 mRNA_2823 0.63 -3.0
304,300 + 11191 mRNA_2823 0.64 1.1
304,300 + 11191 mRNA_2823 0.64 -1.6
304,321 - 11191 mRNA_2823 0.65 -2.1
304,386 - 11191 mRNA_2823 0.70 -1.2
304,400 + 11191 mRNA_2823 0.71 -0.6
304,485 - 11191 mRNA_2823 0.78 -0.6
304,526 - 11191 mRNA_2823 0.81 -3.4
304,555 + 11191 mRNA_2823 0.83 -1.8
304,582 + 11191 mRNA_2823 0.85 -0.4
304,832 + -1.6
304,832 + 0.4
305,177 - 11192 mRNA_2824 0.34 -1.1
305,269 - 11192 mRNA_2824 0.45 -3.4
305,467 - 11192 mRNA_2824 0.67 -0.8
305,590 + 11192 mRNA_2824 0.81 -2.7
305,739 - -0.6