Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2796

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2795: 11163 - SUPERFAMILY--SSF56112, at 233342 to 236388 11163 mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236700 to 240335 11164 mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240577 to 240997 11165 mRNA_2798: 11166 - K03537 POP5 ribonuclease P/MRP protein subunit POP5, at 241326 to 242097 11166

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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235,713 + 11163 mRNA_2795 0.78 0.5
235,775 + 11163 mRNA_2795 0.80 -0.2
235,822 + 11163 mRNA_2795 0.81 -2.6
235,860 + 11163 mRNA_2795 0.83 -2.9
236,129 + -5.2
236,291 + -0.5
236,302 - -3.4
236,326 + 1.2
236,487 + -0.5
236,589 + -0.8
236,604 + -1.1
236,621 - -2.1
239,390 - 11164 mRNA_2796 0.74 -1.7
240,048 - -2.6
240,172 + -1.7
240,245 + -2.6
240,377 + 2.3
240,518 - -0.3
240,527 + -3.0
240,657 - 11165 mRNA_2797 0.19 -2.6
240,664 + 11165 mRNA_2797 0.21 -2.3
240,794 - 11165 mRNA_2797 0.52 -2.3
240,820 - 11165 mRNA_2797 0.58 -4.0
240,840 + 11165 mRNA_2797 0.62 -0.7
240,956 - -0.8
241,121 - -2.7
241,268 - -2.2