Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2785

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2784: 11152 - K20241 WDR44, RAB11BP WD repeat-containing protein 44, at 204617 to 208124 11152 mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208531 to 209463 11153 mRNA_2786: 11154 - Hypothetical Protein, at 209744 to 210942 11154

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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207,613 - 11152 mRNA_2784 0.85 -1.9
207,771 - 11152 mRNA_2784 0.90 -2.4
207,773 - 11152 mRNA_2784 0.90 -0.9
207,780 + -2.8
207,884 - -0.9
208,021 - -1.2
208,066 + -1.8
208,508 - -0.9
208,602 - -1.5
208,656 - 11153 mRNA_2785 0.13 1.7
208,662 + 11153 mRNA_2785 0.14 -0.6
208,691 - 11153 mRNA_2785 0.17 -3.2
208,790 + 11153 mRNA_2785 0.28 -2.1
209,219 - 11153 mRNA_2785 0.74 -0.7
209,278 + 11153 mRNA_2785 0.80 -2.3
209,374 - -4.1
210,026 - 11154 mRNA_2786 0.24 -0.5
210,107 + 11154 mRNA_2786 0.30 -1.0
210,397 - 11154 mRNA_2786 0.54 0.0
210,407 + 11154 mRNA_2786 0.55 0.2
210,431 + 11154 mRNA_2786 0.57 0.2