Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2755

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141143 to 143248 11122 mRNA_2755: 11123 - K20247 EGT2 hercynylcysteine sulfoxide lyase, at 143517 to 145999 11123 mRNA_2756: 11124 - KOG2450 Aldehyde dehydrogenase, at 146345 to 148269 11124

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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142,882 - 11122 mRNA_2754 0.83 -0.2
142,993 - 11122 mRNA_2754 0.88 -3.7
143,013 - 11122 mRNA_2754 0.89 -1.3
143,024 + 11122 mRNA_2754 0.89 -2.6
143,161 - -1.6
143,170 - -1.8
143,238 + -0.9
143,324 + -2.7
143,340 - -1.3
143,466 - -0.1
143,482 + -2.5
143,809 + 11123 mRNA_2755 0.12 -2.2
143,997 + 11123 mRNA_2755 0.19 -0.5
144,167 + 11123 mRNA_2755 0.26 -0.6
144,167 + 11123 mRNA_2755 0.26 -2.3
144,328 - 11123 mRNA_2755 0.33 -0.7
144,342 - 11123 mRNA_2755 0.33 0.2
144,351 - 11123 mRNA_2755 0.34 -1.8
144,379 + 11123 mRNA_2755 0.35 -2.4
144,518 + 11123 mRNA_2755 0.40 -1.5
144,524 - 11123 mRNA_2755 0.41 -1.0
144,601 + 11123 mRNA_2755 0.44 -0.2
144,767 - 11123 mRNA_2755 0.50 -1.0
144,775 - 11123 mRNA_2755 0.51 -1.2
144,776 - 11123 mRNA_2755 0.51 -2.7
145,058 - 11123 mRNA_2755 0.62 -1.6
145,059 - 11123 mRNA_2755 0.62 -1.0
145,202 + 11123 mRNA_2755 0.68 1.1
145,206 - 11123 mRNA_2755 0.68 0.6
145,270 + 11123 mRNA_2755 0.71 -2.1
145,499 - 11123 mRNA_2755 0.80 -0.9
145,517 + 11123 mRNA_2755 0.81 -1.1
145,541 + 11123 mRNA_2755 0.82 0.0
145,552 + 11123 mRNA_2755 0.82 -1.6
145,571 - 11123 mRNA_2755 0.83 -2.6
145,598 - 11123 mRNA_2755 0.84 1.2
145,643 + 11123 mRNA_2755 0.86 0.5
145,929 + -3.5
145,951 + -1.6
146,098 + -0.2
146,100 - -2.5
146,222 - -2.0
146,266 - -2.6
146,266 + -1.3
146,269 + -0.9
146,280 - 0.9
146,284 - -1.4
146,332 + -1.6
146,406 + 1.0
146,421 - 0.4
146,445 - -3.1
146,588 + 11124 mRNA_2756 0.13 -1.9
146,830 + 11124 mRNA_2756 0.25 -3.2
146,899 + 11124 mRNA_2756 0.29 -2.9