Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2747

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114 mRNA_2747: 11115 - Hypothetical Protein, at 129031 to 129720 11115

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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128,621 - -0.2
128,627 - -1.0
128,633 - 0.1
128,655 + -2.8
128,769 - -2.0
128,774 + -3.2
128,778 - -1.3
128,798 - 0.2
129,051 - -1.6
129,059 - -2.3
129,062 + -2.1
129,192 + 11115 mRNA_2747 0.23 1.1
129,231 + 11115 mRNA_2747 0.29 -2.5
129,344 - 11115 mRNA_2747 0.45 -1.2
129,360 + 11115 mRNA_2747 0.48 -4.8
129,382 + 11115 mRNA_2747 0.51 -2.5
129,605 + 11115 mRNA_2747 0.83 -1.8
129,626 - 11115 mRNA_2747 0.86 -0.3
129,641 - 11115 mRNA_2747 0.88 -0.3
129,652 + -2.3
129,677 - -0.7
129,757 + -0.7
129,802 - -1.9
129,811 + -1.2
129,824 + -1.7
129,833 - -1.8
129,861 + 0.6
129,881 - -0.4
129,895 - -0.8
129,897 - -2.0
129,902 - -3.5
129,902 + -0.8
129,917 - -0.5
129,918 + -1.0
129,921 - -2.0
129,923 - -1.9
129,930 + -1.2
129,932 + -2.0
129,940 - -0.3
129,943 + -1.7
129,958 - -0.5
129,965 - -2.7
129,984 - -0.6
129,989 + -0.6
129,993 + 0.3
130,002 + -0.1
130,009 + -2.3
130,023 + -0.0
130,037 - -1.2
130,084 + -0.1
130,247 - -3.2
130,392 + -0.8
130,540 + -1.5
130,549 + -0.9
130,555 + -1.3
130,688 + -0.2
130,701 + -1.1
130,706 - 0.2
130,712 + -2.1
130,719 + 0.5