Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2745

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113 mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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122,753 + -1.0
122,878 - -1.7
122,988 - -2.4
122,995 + -0.6
122,996 - -2.0
123,012 + -2.4
123,013 + -1.8
123,033 + -2.2
123,038 - -1.5
123,041 + -1.7
123,051 - -2.6
123,059 - -1.3
123,060 + -0.6
123,069 + -2.5
123,069 + -1.6
123,071 - -4.0
123,073 + -2.2
123,082 + -3.0
123,105 + -1.4
123,112 - -4.3
123,122 + -0.2
123,151 + -0.7
123,166 + -0.2
123,173 - -0.5
123,173 - -1.1
123,178 + -1.5
123,188 - -0.4
123,202 + -1.8
123,210 + -3.5
123,315 - -2.7
123,394 + -0.7
123,422 - -2.7
123,442 - -0.1
123,474 + -2.8
123,487 - 0.6
123,499 + -2.4
123,502 + 0.4
123,517 + -4.1
123,518 - -1.3
123,547 + -2.1
123,548 - 0.3
123,562 + -0.7
123,573 + -0.4
123,590 - -0.3
123,605 - -1.4
123,608 - -1.4
123,672 + -0.2
123,690 + -1.0
123,725 + -1.2
123,749 + -1.1
123,750 - -3.0
123,863 - -2.2
123,871 + -1.8
123,901 + -1.4
124,183 + 11113 mRNA_2745 0.12 0.1
124,185 - 11113 mRNA_2745 0.12 -2.3
124,353 - 11113 mRNA_2745 0.16 -2.0
124,355 - 11113 mRNA_2745 0.16 -0.8
124,414 - 11113 mRNA_2745 0.18 -0.2
124,458 + 11113 mRNA_2745 0.19 -2.2
124,709 - 11113 mRNA_2745 0.26 -2.6
124,794 - 11113 mRNA_2745 0.28 -1.2
124,794 + 11113 mRNA_2745 0.28 0.4
125,041 + 11113 mRNA_2745 0.35 0.3
125,048 - 11113 mRNA_2745 0.35 -2.5
125,398 - 11113 mRNA_2745 0.44 -1.1
125,714 + 11113 mRNA_2745 0.53 -0.6
125,794 + 11113 mRNA_2745 0.55 -0.8
125,855 + 11113 mRNA_2745 0.57 -0.8
125,941 + 11113 mRNA_2745 0.59 1.3
126,259 - 11113 mRNA_2745 0.68 -0.7
126,267 + 11113 mRNA_2745 0.68 -2.4
126,362 + 11113 mRNA_2745 0.70 -0.7
126,570 + 11113 mRNA_2745 0.76 -1.7
126,715 + 11113 mRNA_2745 0.80 0.8
126,720 - 11113 mRNA_2745 0.80 1.2
126,846 + 11113 mRNA_2745 0.83 -1.6
126,969 - 11113 mRNA_2745 0.87 -2.6
126,969 - 11113 mRNA_2745 0.87 -0.9
127,054 + 11113 mRNA_2745 0.89 -3.7
127,325 + -2.1
127,413 + -3.2
127,419 + -3.6
127,434 - -1.1