Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2744

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119009 to 120330 11111 mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
119,788 - 11111 mRNA_2743 0.59 -0.6
119,796 - 11111 mRNA_2743 0.60 -0.6
119,796 + 11111 mRNA_2743 0.60 -1.6
119,940 - 11111 mRNA_2743 0.70 -0.0
120,072 - 11111 mRNA_2743 0.80 -3.1
120,088 - 11111 mRNA_2743 0.82 0.1
120,097 + 11111 mRNA_2743 0.82 -0.5
120,099 + 11111 mRNA_2743 0.82 -0.2
120,105 + 11111 mRNA_2743 0.83 -1.1
120,246 - -0.4
120,249 + -1.1
120,251 + -1.4
120,516 - -0.8
120,561 + -0.2
120,570 - -2.0
120,700 - -0.2
120,701 + -0.8
120,734 + -2.8
120,827 - -1.3
120,841 - -1.9
120,853 + -2.0
120,860 - -2.3
121,129 - 11112 mRNA_2744 0.18 -4.1
121,397 + 11112 mRNA_2744 0.31 1.2
121,671 + 11112 mRNA_2744 0.45 -1.5
121,719 - 11112 mRNA_2744 0.47 -1.7
122,154 + 11112 mRNA_2744 0.68 0.4
122,409 + 11112 mRNA_2744 0.81 0.1
122,575 + 11112 mRNA_2744 0.89 -1.2
122,576 - 11112 mRNA_2744 0.89 -0.8
122,605 + -2.9
122,753 + -1.0
122,878 - -1.7
122,988 - -2.4
122,995 + -0.6
122,996 - -2.0
123,012 + -2.4
123,013 + -1.8
123,033 + -2.2
123,038 - -1.5
123,041 + -1.7
123,051 - -2.6
123,059 - -1.3
123,060 + -0.6
123,069 + -2.5
123,069 + -1.6
123,071 - -4.0
123,073 + -2.2
123,082 + -3.0
123,105 + -1.4
123,112 - -4.3
123,122 + -0.2
123,151 + -0.7
123,166 + -0.2
123,173 - -0.5
123,173 - -1.1
123,178 + -1.5
123,188 - -0.4
123,202 + -1.8
123,210 + -3.5
123,315 - -2.7
123,394 + -0.7
123,422 - -2.7
123,442 - -0.1
123,474 + -2.8
123,487 - 0.6
123,499 + -2.4
123,502 + 0.4
123,517 + -4.1
123,518 - -1.3
123,547 + -2.1
123,548 - 0.3
123,562 + -0.7
123,573 + -0.4
123,590 - -0.3
123,605 - -1.4
123,608 - -1.4
123,672 + -0.2
123,690 + -1.0
123,725 + -1.2
123,749 + -1.1
123,750 - -3.0