Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2717

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2716: 11084 - Hypothetical Protein, at 70181 to 71077 11084 mRNA_2717: 11085 - HMMPfam-Nitronate monooxygenase-PF03060,SUPERFAMILY--SSF51412, at 71439 to 72597 11085 mRNA_2718: 11086 - SUPERFAMILY--SSF50475, at 72649 to 73814 11086

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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70,625 + 11084 mRNA_2716 0.49 0.4
70,769 + 11084 mRNA_2716 0.66 -1.2
70,773 - 11084 mRNA_2716 0.66 -1.3
70,958 - 11084 mRNA_2716 0.87 -1.8
71,043 + 0.5
71,181 + -0.6
71,217 - 0.5
71,218 - 1.1
71,233 + -3.5
71,234 - -1.8
71,373 - -1.2
71,384 - -0.7
71,390 - -0.5
71,400 + -2.5
71,539 + -2.5
71,557 - 11085 mRNA_2717 0.10 -1.5
71,843 - 11085 mRNA_2717 0.35 -3.0
71,952 + 11085 mRNA_2717 0.44 -1.1
72,350 + 11085 mRNA_2717 0.79 1.0
72,407 - 11085 mRNA_2717 0.84 -1.5
72,468 - 11085 mRNA_2717 0.89 -1.2
72,536 + -0.6
72,536 + -1.3
72,547 - -0.2
72,556 + 0.0
72,563 + -2.3
72,669 + 0.4
72,837 - 11086 mRNA_2718 0.16 -0.5
72,882 + 11086 mRNA_2718 0.20 -1.4
72,887 + 11086 mRNA_2718 0.20 -0.2
72,887 + 11086 mRNA_2718 0.20 0.2
73,025 + 11086 mRNA_2718 0.32 -2.6
73,147 + 11086 mRNA_2718 0.43 -3.1
73,399 + 11086 mRNA_2718 0.64 -0.5
73,415 + 11086 mRNA_2718 0.66 1.7
73,445 - 11086 mRNA_2718 0.68 -3.5
73,452 - 11086 mRNA_2718 0.69 -1.9
73,538 + 11086 mRNA_2718 0.76 -0.1
73,553 - 11086 mRNA_2718 0.78 -3.5
73,583 + 11086 mRNA_2718 0.80 0.5