Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2715

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2714: 11082 - KOG2477 Uncharacterized conserved protein, at 63364 to 66371 11082 mRNA_2715: 11083 - Hypothetical Protein, at 66913 to 70114 11083 mRNA_2716: 11084 - Hypothetical Protein, at 70181 to 71077 11084

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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66,052 - 11082 mRNA_2714 0.89 -1.8
66,444 - -1.8
66,497 - -1.4
66,531 - -0.9
66,643 + -0.0
66,788 - 0.0
66,919 - -3.2
66,979 + -0.2
66,981 - -3.2
67,410 + 11083 mRNA_2715 0.16 -0.8
67,591 - 11083 mRNA_2715 0.21 -0.8
68,134 - 11083 mRNA_2715 0.38 -2.1
68,165 - 11083 mRNA_2715 0.39 -1.7
68,901 - 11083 mRNA_2715 0.62 -1.4
68,920 + 11083 mRNA_2715 0.63 -0.6
69,278 + 11083 mRNA_2715 0.74 0.2
69,392 + 11083 mRNA_2715 0.77 -2.6
69,400 + 11083 mRNA_2715 0.78 0.6
69,473 + 11083 mRNA_2715 0.80 -0.9
69,553 + 11083 mRNA_2715 0.82 -1.5
69,605 - 11083 mRNA_2715 0.84 -4.1
69,711 + 11083 mRNA_2715 0.87 -0.5
69,741 - 11083 mRNA_2715 0.88 -1.3
69,878 - -0.7
70,150 - 0.8
70,289 + 11084 mRNA_2716 0.12 -1.9
70,292 - 11084 mRNA_2716 0.12 -1.1
70,293 + 11084 mRNA_2716 0.12 0.9
70,380 + 11084 mRNA_2716 0.22 -0.6
70,625 + 11084 mRNA_2716 0.49 0.4
70,769 + 11084 mRNA_2716 0.66 -1.2
70,773 - 11084 mRNA_2716 0.66 -1.3
70,958 - 11084 mRNA_2716 0.87 -1.8
71,043 + 0.5