Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2709

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2708: 11076 - Hypothetical Protein, at 52159 to 52641 11076 mRNA_2709: 11077 - Hypothetical Protein, at 52775 to 54075 11077 mRNA_2710: 11078 - BLAST putative protein (N-terminal fragment) [Melanopsichiu..., at 54672 to 56113 11078

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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51,926 + -3.2
51,928 + -0.9
51,964 + -0.7
51,964 + -1.4
52,085 - -0.6
52,087 + -0.7
52,379 - 11076 mRNA_2708 0.46 -1.9
52,503 - 11076 mRNA_2708 0.71 0.6
52,981 - 11077 mRNA_2709 0.16 -1.5
52,988 + 11077 mRNA_2709 0.16 -0.9
52,990 + 11077 mRNA_2709 0.17 0.8
53,108 - 11077 mRNA_2709 0.26 -1.6
53,232 + 11077 mRNA_2709 0.35 0.1
53,556 - 11077 mRNA_2709 0.60 -2.6
53,693 + 11077 mRNA_2709 0.71 -2.8
53,754 + 11077 mRNA_2709 0.75 -2.0
53,989 - -1.6
54,277 + 2.2
54,287 + -0.3
54,291 - -0.3
54,299 + -0.5
54,421 - -1.8
54,473 - -2.1
54,563 - -1.1
54,566 - -0.1
54,567 + -0.9
54,572 + -0.7
54,582 + -2.2
54,595 - -1.7
55,036 - 11078 mRNA_2710 0.25 -0.4
55,074 - 11078 mRNA_2710 0.28 -2.3