Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2703

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2702: 11070 - BLAST TRAF-like [Xanthophyllomyces dendrorhous], at 41116 to 42334 11070 mRNA_2703: 11071 - Hypothetical Protein, at 42633 to 43267 11071 mRNA_2704: 11072 - SUPERFAMILY--SSF54695, at 44136 to 45724 11072

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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41,677 + 11070 mRNA_2702 0.46 -2.3
41,716 + 11070 mRNA_2702 0.49 0.2
41,746 - 11070 mRNA_2702 0.52 0.2
41,800 - 11070 mRNA_2702 0.56 0.8
41,909 + 11070 mRNA_2702 0.65 -2.5
41,912 - 11070 mRNA_2702 0.65 -1.4
41,925 + 11070 mRNA_2702 0.66 -2.3
42,073 - 11070 mRNA_2702 0.79 -1.7
42,181 + 11070 mRNA_2702 0.87 -1.6
42,240 + -2.2
42,267 + -2.1
42,267 - -0.9
42,267 - -2.7
42,377 - -2.4
42,466 - -1.6
42,566 - -1.3
42,617 - 0.3
42,669 + -0.8
42,952 + 11071 mRNA_2703 0.50 0.2
42,953 + 11071 mRNA_2703 0.50 -0.9
42,958 + 11071 mRNA_2703 0.51 -0.1
42,964 - 11071 mRNA_2703 0.52 -2.6
42,968 - 11071 mRNA_2703 0.53 -1.4
43,098 - 11071 mRNA_2703 0.73 -2.9
43,130 - 11071 mRNA_2703 0.78 -0.3
43,249 + 0.0
43,249 - -2.4
43,404 + -0.8
43,406 - 0.1
43,542 + -1.9
43,545 - -1.6
43,734 - -1.8