Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2697

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2696: 11064 - K02147 ATPeV1B, ATP6B V-type H+-transporting ATPase subunit B, at 25787 to 28355 11064 mRNA_2697: 11065 - Hypothetical Protein, at 29246 to 31443 11065 mRNA_2698: 11066 - Hypothetical Protein, at 31777 to 32871 11066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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28,411 - -2.5
28,688 - -1.0
28,697 - -1.1
28,716 + -1.2
28,845 + -3.7
29,004 - -1.9
29,011 + -0.3
29,014 - -0.1
29,024 - -0.5
29,032 + 0.6
29,033 - -3.3
29,044 - -0.3
29,045 - -0.2
29,160 - 0.2
29,161 - -0.9
29,186 + -0.4
29,323 - -0.5
29,367 - -2.3
29,611 + 11065 mRNA_2697 0.17 -2.6
29,740 - 11065 mRNA_2697 0.22 -0.3
29,745 - 11065 mRNA_2697 0.23 -2.1
29,746 - 11065 mRNA_2697 0.23 -1.6
29,763 - 11065 mRNA_2697 0.24 -2.9
29,900 - 11065 mRNA_2697 0.30 -0.1
29,930 - 11065 mRNA_2697 0.31 -4.1
30,022 + 11065 mRNA_2697 0.35 0.6
30,100 + 11065 mRNA_2697 0.39 1.8
30,373 - 11065 mRNA_2697 0.51 -0.1
30,508 - 11065 mRNA_2697 0.57 -3.0
30,519 + 11065 mRNA_2697 0.58 -3.4
30,784 - 11065 mRNA_2697 0.70 -1.8
30,802 + 11065 mRNA_2697 0.71 -1.4
30,846 - 11065 mRNA_2697 0.73 -1.4
30,949 + 11065 mRNA_2697 0.77 -2.5
30,953 - 11065 mRNA_2697 0.78 -1.5
31,071 + 11065 mRNA_2697 0.83 -1.6
31,210 - 11065 mRNA_2697 0.89 -3.0
31,235 + -1.1
31,245 + -0.7
31,247 + -2.1
31,255 + 0.9
31,276 - -1.1
31,515 + -0.7
31,657 - -1.2
31,691 - -1.7
31,697 + -1.4
31,770 - -1.9