Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2669

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2668: 11036 - K00049 GRHPR glyoxylate/hydroxypyruvate reductase, at 720997 to 722358 11036 mRNA_2669: 11037 - Hypothetical Protein, at 722649 to 723844 11037 mRNA_2670: 11038 - SUPERFAMILY--SSF52058, at 724183 to 725340 11038

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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721,691 - 11036 mRNA_2668 0.51 -0.3
721,694 + 11036 mRNA_2668 0.51 0.1
722,091 + 11036 mRNA_2668 0.80 -0.4
722,110 + 11036 mRNA_2668 0.82 -1.8
722,114 - 11036 mRNA_2668 0.82 -3.3
722,139 + 11036 mRNA_2668 0.84 -3.3
722,269 + -1.6
722,273 + 0.3
722,291 + -0.1
722,366 - 0.1
722,399 - -1.9
722,400 - -1.3
722,411 + -0.7
722,456 + -1.0
722,457 + -0.9
723,423 - 11037 mRNA_2669 0.65 -0.5
723,524 - 11037 mRNA_2669 0.73 0.9
723,566 - 11037 mRNA_2669 0.77 -0.4
723,572 + 11037 mRNA_2669 0.77 -0.7
723,587 + 11037 mRNA_2669 0.78 -0.4
723,674 + 11037 mRNA_2669 0.86 0.9
723,718 - 11037 mRNA_2669 0.89 -0.7
723,729 + -0.5
723,744 + -1.7
723,868 + -1.3
723,882 - -0.9
723,882 - -0.8
723,886 - 1.5
723,886 - -0.7
724,086 + -2.5
724,089 + -2.5
724,220 - -0.9
724,229 + -1.9
724,230 + -0.5
724,683 + 11038 mRNA_2670 0.43 1.0
724,791 + 11038 mRNA_2670 0.53 -0.4