Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2668

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717860 to 720887 11035 mRNA_2668: 11036 - K00049 GRHPR glyoxylate/hydroxypyruvate reductase, at 720997 to 722358 11036 mRNA_2669: 11037 - Hypothetical Protein, at 722649 to 723844 11037

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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720,083 + 11035 mRNA_2667 0.73 -2.9
720,145 - 11035 mRNA_2667 0.75 -0.9
720,168 - 11035 mRNA_2667 0.76 -0.1
720,462 + 11035 mRNA_2667 0.86 -0.8
720,574 - 11035 mRNA_2667 0.90 -2.6
720,883 - -1.8
720,908 - 0.6
720,909 + -2.1
720,938 - -1.2
721,029 - -2.7
721,050 + -1.7
721,393 + 11036 mRNA_2668 0.29 -2.1
721,509 + 11036 mRNA_2668 0.38 0.2
721,556 + 11036 mRNA_2668 0.41 -2.1
721,691 - 11036 mRNA_2668 0.51 -0.3
721,694 + 11036 mRNA_2668 0.51 0.1
722,091 + 11036 mRNA_2668 0.80 -0.4
722,110 + 11036 mRNA_2668 0.82 -1.8
722,114 - 11036 mRNA_2668 0.82 -3.3
722,139 + 11036 mRNA_2668 0.84 -3.3
722,269 + -1.6
722,273 + 0.3
722,291 + -0.1
722,366 - 0.1
722,399 - -1.9
722,400 - -1.3
722,411 + -0.7
722,456 + -1.0
722,457 + -0.9