Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2666

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034 mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717860 to 720887 11035

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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714,658 + -1.8
714,969 + -1.8
715,691 + 11034 mRNA_2666 0.30 0.0
715,720 + 11034 mRNA_2666 0.31 -0.7
715,807 + 11034 mRNA_2666 0.35 -0.7
715,825 - 11034 mRNA_2666 0.36 0.8
715,958 + 11034 mRNA_2666 0.42 -2.3
715,959 - 11034 mRNA_2666 0.42 1.4
715,997 + 11034 mRNA_2666 0.44 -3.5
716,376 - 11034 mRNA_2666 0.61 -1.3
716,579 + 11034 mRNA_2666 0.70 -2.3
716,597 - 11034 mRNA_2666 0.70 -1.2
716,602 + 11034 mRNA_2666 0.71 -2.8
716,699 + 11034 mRNA_2666 0.75 -1.7
716,707 - 11034 mRNA_2666 0.75 -0.2
716,759 + 11034 mRNA_2666 0.78 -1.7
716,762 + 11034 mRNA_2666 0.78 -1.3
716,776 + 11034 mRNA_2666 0.78 -1.7
716,894 - 11034 mRNA_2666 0.83 -2.3
716,924 - 11034 mRNA_2666 0.85 -1.2
716,953 - 11034 mRNA_2666 0.86 -1.1
717,048 - -2.0
717,069 + -0.2
717,107 - -1.1
717,216 + 0.1
717,226 - -2.0
717,229 - -1.4
717,230 + -2.3
717,231 - -1.4
717,243 - 0.7
717,243 - -2.2
717,245 - -1.0
717,245 - -0.4
717,248 + -2.1
717,248 - -3.4
717,250 - -3.4
717,251 + -0.7
717,253 + -1.6
717,258 + 0.9
717,268 - 0.2
717,272 + -1.6
717,275 - 1.4
717,279 + -1.4
717,279 + -1.1
717,279 + -0.4
717,303 + -3.4
717,326 + -2.7
717,354 + -1.9
717,426 + -1.8
717,438 - -1.6
717,443 + -1.1
717,447 + 0.2
717,448 - -1.0
717,449 + -0.6
717,456 - -0.5
717,456 - -0.4
717,456 - -0.1
717,466 + -2.0
717,595 - -1.4
717,597 - -1.8
717,622 + -1.1
717,633 + 1.1
717,645 - -0.4
717,649 - -1.5
717,656 + -0.6
717,668 - -0.5
717,791 + -2.0
717,798 - -2.7
717,807 + -0.9
717,809 + -2.3
717,915 + -1.8
718,111 + -2.4
718,226 - 11035 mRNA_2667 0.12 -1.7