Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2659

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2658: 11026 - BLAST transmembrane amino acid transporter protein [Rhizoct..., at 696995 to 699580 11026 mRNA_2659: 11027 - Hypothetical Protein, at 699650 to 700523 11027 mRNA_2660: 11028 - Hypothetical Protein, at 700726 to 702526 11028

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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698,914 - 11026 mRNA_2658 0.74 -1.4
699,258 - 11026 mRNA_2658 0.88 -0.1
699,387 - -0.9
699,531 + -0.2
699,737 + 0.2
699,747 - 11027 mRNA_2659 0.11 0.1
699,831 - 11027 mRNA_2659 0.21 -2.3
699,931 + 11027 mRNA_2659 0.32 0.9
699,933 - 11027 mRNA_2659 0.32 0.6
699,973 + 11027 mRNA_2659 0.37 -1.6
700,124 - 11027 mRNA_2659 0.54 -1.4
700,125 + 11027 mRNA_2659 0.54 0.3
700,259 + 11027 mRNA_2659 0.70 -1.1
700,399 - 11027 mRNA_2659 0.86 -1.3
700,410 - 11027 mRNA_2659 0.87 -1.3
700,552 + -2.4
700,554 - -2.1
700,569 + -0.9
700,572 - -2.6
700,694 - -1.3
700,710 - -0.0
700,714 - -0.8
700,827 - 1.0
700,864 + -1.0
700,880 - -2.3
700,890 + -0.3