Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2651

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2650: 11018 - BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa], at 676679 to 679842 11018 mRNA_2651: 11019 - Hypothetical Protein, at 680407 to 680751 11019 mRNA_2652: 11020 - Hypothetical Protein, at 680993 to 681631 11020

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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679,445 + 11018 mRNA_2650 0.87 -2.7
679,561 - -1.7
679,584 + -0.9
679,887 - -0.1
679,901 + 1.0
680,298 - -1.8
680,371 - -1.0
680,375 - 0.1
680,473 - 11019 mRNA_2651 0.19 -0.4
680,507 - 11019 mRNA_2651 0.29 -0.6
680,610 + 11019 mRNA_2651 0.59 -4.2
680,776 + -0.5
680,782 + -1.3
681,495 + 11020 mRNA_2652 0.79 -1.4
681,673 + -1.1
681,685 - -0.2
681,694 + -0.8
681,725 - -3.4