Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2644

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2643: 11011 - K01254 LTA4H leukotriene-A4 hydrolase, at 661173 to 664262 11011 mRNA_2644: 11012 - SUPERFAMILY--SSF52058, at 664432 to 665418 11012 mRNA_2645: 11013 - Hypothetical Protein, at 665744 to 666738 11013

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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663,447 + 11011 mRNA_2643 0.74 -2.7
663,624 - 11011 mRNA_2643 0.79 -1.0
663,770 + 11011 mRNA_2643 0.84 0.5
663,897 + 11011 mRNA_2643 0.88 -1.4
664,051 - -1.3
664,272 + 0.2
664,351 + -0.5
664,428 - 1.5
664,460 + -0.1
664,478 + -0.4
664,481 - -2.4
664,487 + -1.6
664,604 - 11012 mRNA_2644 0.17 -1.1
665,337 - -1.5
665,575 - -1.0
665,655 + -2.7
665,794 - 2.0
665,794 - -0.7
665,888 + 11013 mRNA_2645 0.14 -3.8
665,934 + 11013 mRNA_2645 0.19 0.5
666,100 - 11013 mRNA_2645 0.36 -2.5
666,102 + 11013 mRNA_2645 0.36 -3.0
666,207 + 11013 mRNA_2645 0.47 -1.4
666,375 + 11013 mRNA_2645 0.63 -1.0