Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2639

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650946 to 653673 11006 mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007 mRNA_2640: 11008 - Hypothetical Protein, at 656963 to 657920 11008

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
653,580 + -0.7
653,757 - -3.0
653,899 - -0.1
653,900 + -2.5
653,904 - -1.5
654,036 + -1.3
654,325 - -1.5
654,327 - -2.3
654,330 - -1.8
654,346 + -1.2
654,353 - -1.2
654,379 + -1.8
654,385 - 1.5
654,387 + -1.7
654,389 + -1.1
654,390 + -2.3
654,392 + -2.7
654,393 - -2.2
654,393 - -2.1
654,393 + -0.6
654,394 - -1.1
654,395 - -1.3
654,396 + -0.5
654,397 + -0.4
654,398 + 1.4
654,413 - -0.4
654,414 + -4.3
654,419 + -3.1
654,427 + -0.5
654,429 - 1.1
654,698 + 11007 mRNA_2639 0.12 -0.1
654,798 + 11007 mRNA_2639 0.19 -1.9
655,132 + 11007 mRNA_2639 0.40 -2.8
655,351 + 11007 mRNA_2639 0.55 -1.5
655,560 - 11007 mRNA_2639 0.68 -2.2
655,645 - 11007 mRNA_2639 0.74 -2.2
655,663 + 11007 mRNA_2639 0.75 -0.1
655,669 - 11007 mRNA_2639 0.76 0.7
655,832 - 11007 mRNA_2639 0.86 -2.4
655,867 + 11007 mRNA_2639 0.88 -0.6
655,882 + 11007 mRNA_2639 0.89 -1.7
655,990 - -1.8
656,142 + -1.2
656,158 + -0.5
656,161 + -1.8
656,328 + -1.8
656,329 - -0.7
656,461 + -1.8
656,573 - -1.9
656,596 + -2.0
656,606 - -0.6
656,769 - -1.3
656,882 + -0.8