Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2632

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2632: 11000 - Hypothetical Protein, at 636103 to 638450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638578 to 641420 11001

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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635,288 + 0.0
635,445 + -0.4
635,468 - 0.3
635,733 - -0.4
635,736 - 1.2
635,859 - -1.4
635,877 + 0.0
635,884 - -1.5
635,908 - -3.7
635,930 + -4.1
635,941 + -1.2
635,990 - -1.0
636,026 + -1.3
636,060 - 0.2
636,061 + -2.0
636,158 - -1.8
636,242 - -3.8
636,256 + -2.1
636,356 - 11000 mRNA_2632 0.11 -2.3
636,402 + 11000 mRNA_2632 0.13 -0.6
636,619 + 11000 mRNA_2632 0.22 -0.8
636,943 + 11000 mRNA_2632 0.36 0.4
636,943 + 11000 mRNA_2632 0.36 0.9
637,064 - 11000 mRNA_2632 0.41 -0.6
637,239 + 11000 mRNA_2632 0.48 -0.6
637,360 + 11000 mRNA_2632 0.54 -1.8
637,493 - 11000 mRNA_2632 0.59 -0.8
637,547 + 11000 mRNA_2632 0.61 -1.9
637,722 - 11000 mRNA_2632 0.69 -1.0
637,722 - 11000 mRNA_2632 0.69 1.9
637,730 + 11000 mRNA_2632 0.69 -2.0
637,835 + 11000 mRNA_2632 0.74 -2.5
637,967 - 11000 mRNA_2632 0.79 -3.8
637,994 - 11000 mRNA_2632 0.81 -1.1
638,111 + 11000 mRNA_2632 0.86 -1.3
638,157 - 11000 mRNA_2632 0.87 -0.9
638,689 + -1.6
638,943 + 11001 mRNA_2633 0.13 -0.1
638,973 + 11001 mRNA_2633 0.14 -0.5
639,105 - 11001 mRNA_2633 0.19 0.0
639,206 + 11001 mRNA_2633 0.22 -0.7
639,304 - 11001 mRNA_2633 0.26 -1.1
639,394 + 11001 mRNA_2633 0.29 0.3