Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2626

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618435 to 621494 10993 mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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620,813 - 10993 mRNA_2625 0.78 -2.7
620,819 - 10993 mRNA_2625 0.78 -2.5
620,851 + 10993 mRNA_2625 0.79 0.0
620,975 + 10993 mRNA_2625 0.83 -1.1
621,110 - 10993 mRNA_2625 0.87 -1.1
621,138 + 10993 mRNA_2625 0.88 0.9
621,400 + -1.8
621,415 - -2.7
621,513 - -4.6
621,721 - -1.3
621,833 - -1.7
622,121 - 10994 mRNA_2626 0.22 -1.3
622,171 + 10994 mRNA_2626 0.25 -3.3
622,176 - 10994 mRNA_2626 0.26 -1.5
622,302 + 10994 mRNA_2626 0.34 -0.4
622,347 + 10994 mRNA_2626 0.37 -0.4
622,385 + 10994 mRNA_2626 0.39 -1.6
622,453 + 10994 mRNA_2626 0.44 -1.5
622,582 - 10994 mRNA_2626 0.52 -0.8
622,887 + 10994 mRNA_2626 0.72 -2.1
622,990 - 10994 mRNA_2626 0.78 1.0
623,181 + -1.8
623,305 - -0.5
623,452 - -1.2
623,457 - 0.6
623,460 + -2.2
623,461 + -0.8
623,586 + 1.4
623,608 + -3.0
623,620 - -1.6
623,622 - -2.9
623,627 - -1.9
623,631 - -1.4
623,752 + -1.0
623,761 + -1.4
623,764 - -2.4
623,771 - -1.2
623,906 + -5.0
623,908 + -1.5
623,913 + -1.3
623,919 + -2.0
624,074 + -2.8
624,167 + -1.1