Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2621

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609303 to 611052 10988 mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613719 to 614794 10990

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
610,424 - 10988 mRNA_2620 0.64 -2.1
610,453 - 10988 mRNA_2620 0.66 0.3
610,570 - 10988 mRNA_2620 0.72 -1.0
610,864 + 10988 mRNA_2620 0.89 -0.1
610,881 - -1.3
610,885 + 1.0
610,901 - -0.1
611,012 - -0.9
611,025 + -0.9
611,106 + -2.9
611,132 - -2.8
611,143 - -3.3
611,153 - 0.9
611,153 - -0.2
611,153 - -1.1
611,162 + -0.6
611,164 - -3.2
611,165 + -3.9
611,166 + -2.1
611,180 + -1.1
611,182 - -3.0
611,182 + -1.5
611,183 - 0.2
611,184 - -0.3
611,184 - -1.1
611,184 - -3.7
611,190 - -1.9
611,194 + -3.8
611,199 + -1.5
611,199 + -1.4
611,209 + -3.1
611,209 + -1.8
611,210 + 0.4
611,210 + -2.2
611,210 - -3.1
611,211 + -2.0
611,245 + 0.2
611,246 - -1.1
611,246 - -1.6
611,252 + -0.6
611,254 + -1.4
611,263 + -3.3
611,265 + -1.5
611,300 - -0.1
611,302 - -3.1
611,314 + -1.2
611,314 - -2.8
611,316 - -0.1
611,320 - 0.1
611,330 + -2.7
611,332 + 0.1
611,334 + -2.9
611,338 - -2.5
611,341 - -0.9
611,355 - -3.5
611,363 + -0.9
611,455 - -2.9
611,476 + -1.3
611,612 + 10989 mRNA_2621 0.11 0.4
611,614 - 10989 mRNA_2621 0.11 -1.0
611,632 - 10989 mRNA_2621 0.12 -1.3
611,632 - 10989 mRNA_2621 0.12 0.1
611,682 - 10989 mRNA_2621 0.15 -1.4
611,746 - 10989 mRNA_2621 0.18 -0.7
611,748 - 10989 mRNA_2621 0.18 -3.7
611,749 - 10989 mRNA_2621 0.18 -2.3
611,773 + 10989 mRNA_2621 0.19 -0.7
611,792 + 10989 mRNA_2621 0.20 -3.3
611,793 - 10989 mRNA_2621 0.20 -1.5
611,805 - 10989 mRNA_2621 0.21 -0.6
611,812 + 10989 mRNA_2621 0.21 -2.7
611,819 - 10989 mRNA_2621 0.22 0.5
611,848 + 10989 mRNA_2621 0.23 1.0
611,891 - 10989 mRNA_2621 0.25 -1.7
611,906 - 10989 mRNA_2621 0.26 -0.3
611,929 - 10989 mRNA_2621 0.27 -3.3
611,982 + 10989 mRNA_2621 0.30 -3.0
612,051 - 10989 mRNA_2621 0.33 -0.7
612,063 + 10989 mRNA_2621 0.34 -1.1
612,092 + 10989 mRNA_2621 0.35 -2.4
612,350 - 10989 mRNA_2621 0.48 -0.7
612,502 + 10989 mRNA_2621 0.56 -2.1
612,583 - 10989 mRNA_2621 0.60 -0.2
612,590 - 10989 mRNA_2621 0.60 -0.0
612,619 - 10989 mRNA_2621 0.62 -0.3
612,661 + 10989 mRNA_2621 0.64 -0.4
612,757 - 10989 mRNA_2621 0.69 0.4
612,769 - 10989 mRNA_2621 0.69 -2.4
612,773 - 10989 mRNA_2621 0.70 -3.5
613,053 - 10989 mRNA_2621 0.84 -2.7
613,083 + 10989 mRNA_2621 0.85 -1.6
613,213 - -2.1
613,369 - 0.1
613,463 - 0.4
613,465 - -1.5
613,466 + -1.0
613,480 - -1.2
613,514 + -1.2
613,514 - -1.4
613,516 - -0.8
613,521 + -1.5
613,530 + 1.4
613,658 + -1.5
613,788 - 1.2
613,865 + 10990 mRNA_2622 0.14 0.1
613,946 - 10990 mRNA_2622 0.21 -0.5
614,053 + 10990 mRNA_2622 0.31 -0.1