Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2619

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2618: 10986 - Hypothetical Protein, at 606513 to 607761 10986 mRNA_2619: 10987 - Hypothetical Protein, at 608244 to 608759 10987 mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609303 to 611052 10988

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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607,790 + -3.8
607,799 - -1.1
607,912 - -3.0
607,913 - -1.9
607,928 + -0.7
608,061 + -0.9
608,070 + -0.2
608,071 - -2.0
608,077 + -0.7
608,081 + -1.0
608,088 + -1.4
608,088 + -1.1
608,217 - -1.8
608,233 + -2.4
608,388 + 10987 mRNA_2619 0.28 -3.4
608,396 - 10987 mRNA_2619 0.29 0.1
608,484 - 10987 mRNA_2619 0.47 -1.1
608,486 - 10987 mRNA_2619 0.47 -0.1
608,486 + 10987 mRNA_2619 0.47 -2.4
608,511 - 10987 mRNA_2619 0.52 -2.5
608,516 - 10987 mRNA_2619 0.53 -1.2
608,655 - 10987 mRNA_2619 0.80 0.3
608,658 - 10987 mRNA_2619 0.80 -2.6
608,663 - 10987 mRNA_2619 0.81 -1.1
608,673 + 10987 mRNA_2619 0.83 -0.7
608,688 - 10987 mRNA_2619 0.86 -2.5
608,787 + -1.8
608,794 - -1.6
608,795 + -0.4
608,804 - -1.4
608,819 + -1.6
608,837 - -1.5
608,913 + -1.7
608,936 - -2.5
608,942 - -1.4
608,945 - -0.1
608,946 - 0.2
608,947 + -1.3
608,950 - 0.2
608,952 - 0.0
608,953 - -0.7
608,953 + -2.4
608,954 - 0.7
608,958 - 0.9
608,968 + -3.0
609,004 + -0.2
609,014 + -2.4
609,030 + -1.2
609,031 + -2.4
609,069 + -1.8
609,073 + -0.6
609,109 + -1.7
609,209 + -1.7
609,213 - 2.4
609,240 + -1.1
609,250 + 1.5
609,253 + -0.1
609,257 + -1.6
609,263 - -0.8
609,265 - -0.8
609,276 + -0.2
609,366 + 1.2
609,367 - -3.0
609,371 - 1.0
609,379 + 0.3
609,380 - -0.8
609,380 - 0.2
609,382 + -2.3
609,384 - -0.0
609,385 + -2.1
609,399 - -1.7
609,405 - -1.3
609,407 - -2.9
609,416 + -0.6
609,416 - -1.3
609,448 + -2.8
609,526 - 10988 mRNA_2620 0.13 -0.6
609,528 + 10988 mRNA_2620 0.13 0.7
609,537 - 10988 mRNA_2620 0.13 -0.3
609,540 + 10988 mRNA_2620 0.14 -1.3
609,546 - 10988 mRNA_2620 0.14 -1.6
609,548 + 10988 mRNA_2620 0.14 -1.7
609,548 - 10988 mRNA_2620 0.14 -2.0
609,550 + 10988 mRNA_2620 0.14 -0.8
609,562 + 10988 mRNA_2620 0.15 -0.7
609,562 + 10988 mRNA_2620 0.15 0.2
609,563 + 10988 mRNA_2620 0.15 -0.3
609,565 + 10988 mRNA_2620 0.15 -2.7
609,567 + 10988 mRNA_2620 0.15 -3.0
609,573 - 10988 mRNA_2620 0.15 0.4
609,577 + 10988 mRNA_2620 0.16 -0.8
609,593 + 10988 mRNA_2620 0.17 -3.0
609,679 + 10988 mRNA_2620 0.21 -1.7
609,688 - 10988 mRNA_2620 0.22 -1.3
609,691 + 10988 mRNA_2620 0.22 -1.2
609,694 + 10988 mRNA_2620 0.22 -1.0
609,701 - 10988 mRNA_2620 0.23 -1.1
609,704 - 10988 mRNA_2620 0.23 -1.1
609,721 - 10988 mRNA_2620 0.24 -1.5
609,725 + 10988 mRNA_2620 0.24 -1.1