Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2606

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973 mRNA_2606: 10974 - Hypothetical Protein, at 581408 to 582467 10974 mRNA_2607: 10975 - KOG4102 Uncharacterized conserved protein, at 582757 to 583405 10975

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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580,561 - -0.6
580,687 + -1.4
580,693 + -0.9
580,695 + -1.8
580,793 - -2.9
580,849 + -1.4
580,938 + -2.2
580,974 + 0.2
580,981 - -1.8
580,985 + -0.4
580,997 + -1.9
581,004 + -1.3
581,111 - -1.8
581,126 - -0.5
581,275 - 0.0
581,275 + -1.2
581,440 - -0.4
581,722 + 10974 mRNA_2606 0.30 0.2
581,725 - 10974 mRNA_2606 0.30 -2.3
581,845 - 10974 mRNA_2606 0.41 -1.0
581,950 + 10974 mRNA_2606 0.51 2.0
582,063 - 10974 mRNA_2606 0.62 -0.5
582,124 - 10974 mRNA_2606 0.68 0.2
582,284 + 10974 mRNA_2606 0.83 -2.6
582,416 - -0.8
582,461 - -2.4
582,531 + -2.0
582,549 + -2.5
582,567 + -1.8
582,585 - -2.3
582,592 + -1.3
582,717 + -3.5
582,718 + -2.4