Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2599

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2598: 10966 - Hypothetical Protein, at 566184 to 566984 10966 mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967 mRNA_2600: 10968 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 568894 to 570450 10968

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
566,548 + 10966 mRNA_2598 0.45 0.0
566,715 - 10966 mRNA_2598 0.66 -2.1
566,987 - -0.9
567,007 + -0.4
567,278 - -1.4
567,296 + 0.0
567,528 - 1.7
567,549 - -0.9
567,551 + -1.0
567,702 - 10967 mRNA_2599 0.32 -1.6
567,851 - 10967 mRNA_2599 0.61 -2.4
568,000 + -4.2
568,116 - -2.3
568,138 - -0.1
568,143 - -1.3
568,152 - -1.0
568,154 + -0.5
568,175 + 1.3
568,177 - -2.0
568,179 - -1.8
568,181 - -2.0
568,185 + -2.5
568,190 - -2.1
568,197 + -3.1
568,201 - -0.5
568,205 - -2.4
568,216 + -0.4
568,297 - -3.5
568,306 - -0.1
568,317 - -0.5
568,331 + -0.9
568,353 - 0.3
568,361 - -1.3
568,414 - -4.1
568,453 + -2.4
568,498 - -1.3
568,587 - -2.2
568,782 - -1.5
568,783 + -2.1
568,904 - -0.5
568,932 + -0.7
568,946 - -2.9
568,948 - -1.7
568,951 + -0.9
568,957 + -0.7
568,957 + -2.1
568,958 - -1.5
568,958 - -1.0
568,964 - -1.2
568,965 + -1.6
568,968 + -1.3
568,968 - -2.6
568,971 + -3.4
568,971 + -0.9
568,971 + 0.3
568,971 - 1.2
568,971 + -0.2
568,971 + -1.5
568,975 - -2.6
568,976 + -1.1
568,978 + -1.0
568,980 + -0.8
568,983 - -3.5
568,984 - -1.8
568,986 + -0.7
568,986 - -0.3
568,990 - -2.6
568,990 + 0.6
568,992 - -2.4
568,993 + -1.5
568,993 + -1.9
568,994 + -1.6
568,996 + -0.5
568,997 + -0.7
568,997 + -1.9
568,999 + -1.0
569,002 + -0.3
569,004 + 1.9
569,006 + 0.8
569,018 - -0.7