Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2598

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2597: 10965 - Hypothetical Protein, at 564104 to 565284 10965 mRNA_2598: 10966 - Hypothetical Protein, at 566184 to 566984 10966 mRNA_2599: 10967 - KOG2619 Fucosyltransferase, at 567541 to 568045 10967

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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565,226 + -2.9
565,290 - 0.1
565,374 + -1.9
565,408 + -0.5
565,572 + -0.9
565,804 + -2.3
565,918 - -0.6
566,036 - -1.3
566,042 - 0.5
566,047 - -0.8
566,073 - -0.4
566,076 - -2.1
566,077 - -0.7
566,084 + -1.6
566,085 - 0.6
566,086 + -2.0
566,096 + -0.5
566,100 - -2.5
566,100 - -0.7
566,100 - 0.3
566,102 + -1.2
566,103 + -1.7
566,103 + -1.4
566,116 - -2.6
566,117 - -1.3
566,120 + -2.1
566,126 - -0.2
566,128 - -0.4
566,130 + -2.5
566,132 - 0.1
566,135 + -2.2
566,137 - -2.0
566,146 + -2.3
566,147 + -1.5
566,148 - 0.2
566,157 + -2.0
566,258 + -2.4
566,272 - 10966 mRNA_2598 0.11 -1.0
566,278 + 10966 mRNA_2598 0.12 -0.5
566,298 + 10966 mRNA_2598 0.14 -1.9
566,300 + 10966 mRNA_2598 0.14 -0.7
566,302 + 10966 mRNA_2598 0.15 0.5
566,394 - 10966 mRNA_2598 0.26 -1.5
566,425 + 10966 mRNA_2598 0.30 -0.7
566,548 + 10966 mRNA_2598 0.45 0.0
566,715 - 10966 mRNA_2598 0.66 -2.1
566,987 - -0.9
567,007 + -0.4
567,278 - -1.4
567,296 + 0.0
567,528 - 1.7
567,549 - -0.9
567,551 + -1.0
567,702 - 10967 mRNA_2599 0.32 -1.6
567,851 - 10967 mRNA_2599 0.61 -2.4