Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2565

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2564: 10932 - SUPERFAMILY--SSF52058, at 455625 to 456615 10932 mRNA_2565: 10933 - K00799 GST, gst glutathione S-transferase, at 457320 to 458239 10933 mRNA_2566: 10934 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 458931 to 461054 10934

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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456,381 + 10932 mRNA_2564 0.76 0.8
456,526 + -1.5
456,822 - -0.6
456,846 + -0.7
456,975 - -1.5
457,134 + -0.1
457,153 + -0.1
457,157 + -1.1
457,430 + 10933 mRNA_2565 0.12 -0.4
457,540 + 10933 mRNA_2565 0.24 -1.0
457,576 - 10933 mRNA_2565 0.28 -1.9
457,676 + 10933 mRNA_2565 0.39 -2.3
457,725 + 10933 mRNA_2565 0.44 0.2
457,972 - 10933 mRNA_2565 0.71 0.7
458,008 - 10933 mRNA_2565 0.75 -1.3
458,162 + 1.1
458,283 - -0.6
458,426 + -0.8
458,440 - -3.3
458,443 - 1.0
458,483 - -4.1
458,596 + -1.9
458,604 - -1.2
458,605 - -3.9
458,623 - -3.2
458,629 - -2.9
458,630 - -0.1
458,749 - -1.7
458,753 - -2.0
458,762 + -0.7
458,763 + -1.7
458,783 + -2.9
458,784 + 1.6
458,788 + 0.1
458,905 + 0.8
459,072 - -1.8
459,100 - -1.6