Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2558

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347 10925 mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693 10926 mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474 10927

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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438,575 - 10925 mRNA_2557 0.57 -1.3
438,662 - 10925 mRNA_2557 0.62 -1.2
438,832 - 10925 mRNA_2557 0.71 -0.7
438,962 - 10925 mRNA_2557 0.78 0.0
439,070 - 10925 mRNA_2557 0.84 -1.1
439,070 - 10925 mRNA_2557 0.84 -0.7
439,273 - -0.1
439,301 - -1.1
439,994 + 10926 mRNA_2558 0.41 -1.6
440,130 - 10926 mRNA_2558 0.52 -1.3
440,370 - 10926 mRNA_2558 0.73 -2.1
440,370 + 10926 mRNA_2558 0.73 -1.1
440,559 + 10926 mRNA_2558 0.89 -1.6
440,684 + -1.6
440,744 + -0.1
440,848 + -1.9
440,870 + -3.3
440,872 + 0.2
440,887 - -1.0
441,018 - -2.2
441,030 - -1.0
441,152 - -0.4
441,157 - 0.1
441,168 - 0.1
441,179 + -3.2
441,305 - -2.1
441,309 + -1.7
441,317 - -2.5
441,475 - 10927 mRNA_2559 0.22 -0.1
441,586 - 10927 mRNA_2559 0.30 -0.9
441,587 - 10927 mRNA_2559 0.30 -1.9
441,602 + 10927 mRNA_2559 0.31 -2.2