Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2543

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404821 to 406181 10912

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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402,792 - 10910 mRNA_2542 0.77 -0.6
402,813 - 10910 mRNA_2542 0.79 -0.7
402,827 + 10910 mRNA_2542 0.79 -1.3
402,941 + 10910 mRNA_2542 0.86 1.0
403,062 - -0.7
403,063 + -1.8
403,069 + -0.4
403,374 + -2.5
403,396 + 0.5
403,419 + -1.9
403,633 + 10911 mRNA_2543 0.19 -1.6
403,640 + 10911 mRNA_2543 0.20 -0.8
404,000 - 10911 mRNA_2543 0.55 -0.3
404,264 - 10911 mRNA_2543 0.81 -2.6
404,443 + -3.6
404,564 + -2.2
404,849 + -0.3
405,047 - 10912 mRNA_2544 0.17 -1.9
405,090 + 10912 mRNA_2544 0.20 -2.6
405,146 - 10912 mRNA_2544 0.24 -0.9
405,295 - 10912 mRNA_2544 0.35 -1.0
405,343 - 10912 mRNA_2544 0.38 -1.3