Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2538

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2537: 10905 - BLAST Alba domain-containing protein [Rhizoctonia solani AG..., at 392613 to 393652 10905 mRNA_2538: 10906 - SUPERFAMILY--SSF56112, at 393822 to 395821 10906 mRNA_2539: 10907 - Hypothetical Protein, at 396094 to 398437 10907

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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393,569 + -2.3
393,869 + -2.1
394,613 - 10906 mRNA_2538 0.40 -0.6
394,716 - 10906 mRNA_2538 0.45 -0.1
394,864 + 10906 mRNA_2538 0.52 -0.6
394,869 + 10906 mRNA_2538 0.52 -3.8
395,138 - 10906 mRNA_2538 0.66 -1.2
395,441 + 10906 mRNA_2538 0.81 -2.0
395,554 - 10906 mRNA_2538 0.87 -2.4
395,578 + 10906 mRNA_2538 0.88 1.3
395,600 + 10906 mRNA_2538 0.89 0.5
395,608 + 10906 mRNA_2538 0.89 -0.9
395,610 - 10906 mRNA_2538 0.89 -0.7
395,747 + 2.3
395,794 + 1.0
395,926 + 1.2
396,024 + -2.2
396,048 - 0.6
396,172 + -0.4
396,180 - 0.0
396,196 - -1.0
396,196 - -0.2
396,208 + -0.9
396,367 + 10907 mRNA_2539 0.12 -0.6
396,464 + 10907 mRNA_2539 0.16 -0.0
396,528 + 10907 mRNA_2539 0.19 -2.9