Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2532

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900 mRNA_2533: 10901 - K10706 SETX, ALS4 senataxin, at 377456 to 384141 10901

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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374,774 + 10899 mRNA_2531 0.80 0.2
375,306 + -0.5
375,339 + -2.0
375,345 - -2.6
375,473 - -1.5
375,501 + -2.0
375,506 + -2.3
375,561 - -1.9
376,774 + 10900 mRNA_2532 0.73 -1.7
376,809 + 10900 mRNA_2532 0.76 -3.1
377,103 + -2.6
377,194 - -1.3
377,214 + -3.6
377,248 - -1.1
377,275 - -2.5
377,475 - -1.9
377,549 - 1.2
377,569 + -0.6
377,841 - -3.1
377,960 - -3.1
378,173 + 10901 mRNA_2533 0.11 -2.2