Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2529

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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365,991 - 10896 mRNA_2528 0.54 0.2
366,085 + 10896 mRNA_2528 0.59 -2.7
366,710 + 0.1
367,018 - -2.0
367,274 - 10897 mRNA_2529 0.19 -0.9
367,460 - 10897 mRNA_2529 0.30 0.4
367,469 + 10897 mRNA_2529 0.30 -1.5
367,690 - 10897 mRNA_2529 0.43 -1.5
367,720 - 10897 mRNA_2529 0.45 -2.4
367,759 - 10897 mRNA_2529 0.47 -3.1
367,842 + 10897 mRNA_2529 0.52 -1.1
367,871 + 10897 mRNA_2529 0.54 -1.1
367,922 - 10897 mRNA_2529 0.57 -1.0
367,996 + 10897 mRNA_2529 0.61 0.9
367,996 + 10897 mRNA_2529 0.61 1.5
367,997 - 10897 mRNA_2529 0.61 -1.5
368,122 + 10897 mRNA_2529 0.68 -2.4
368,172 - 10897 mRNA_2529 0.71 -0.1
368,180 + 10897 mRNA_2529 0.71 -3.0
368,213 - 10897 mRNA_2529 0.73 -1.8
368,219 - 10897 mRNA_2529 0.74 -0.2
368,287 - 10897 mRNA_2529 0.78 -0.7
368,747 - 0.6
368,761 + -1.0
368,772 + -2.0
369,193 + 10898 mRNA_2530 0.14 -0.1
369,440 + 10898 mRNA_2530 0.29 0.7
369,446 + 10898 mRNA_2530 0.29 -2.2
369,574 - 10898 mRNA_2530 0.37 -2.2
369,653 - 10898 mRNA_2530 0.41 -0.6